org.wandora.application.tools.importers

Class OBOImport.OBOParser

java.lang.Object

org.wandora.application.tools.importers.OBOImport.OBOParser

Enclosing class:

OBOImport

public class OBOImport.OBOParser
extends java.lang.Object

OBOParser class implements parser for OBO flat file format. OBOImport uses the parser to convert OBO flat files to Topic Maps.

Field Summary

Fields

Modifier and Type	Field and Description
boolean	debug
int	deprecationMsgLimit
private OBOImport.Header	header
private java.io.BufferedReader	in
private OBOImport	parent
(package private) Topic	root
private OBOImport.Stanza	stanza
private int	stanzaCounter
private TopicMap	tm
(package private) Topic	wandoraClass

Constructor Summary

Constructors

Constructor and Description
OBOParser(java.io.BufferedReader in, TopicMap tm, OBOImport parent) Constructor for OBOParser.

Method Summary

Modifier and Type	Method and Description
Association	createAssociation(java.lang.String associationType, Topic player1Topic, java.lang.String role1, Topic player2Topic, java.lang.String role2)
Association	createAssociation(java.lang.String associationType, Topic player1Topic, java.lang.String role1, Topic player2Topic, java.lang.String role2, Topic player3Topic, java.lang.String role3)
Association	createAssociation(java.lang.String associationType, Topic player1Topic, java.lang.String role1, Topic player2Topic, java.lang.String role2, Topic player3Topic, java.lang.String role3, Topic player4Topic, java.lang.String role4)
private Topic	getOrCreateTopic(Locator si, java.lang.String basename)
private Topic	getOrCreateTopic(java.lang.String si)
private Topic	getOrCreateTopic(java.lang.String si, java.lang.String basename)
void	initializeTopicMap(TopicMap tm) Creates frequently used topics into the Topic Map before conversion starts.
void	logDeprecation(java.lang.String tag, java.lang.String id)
void	logDeprecation(java.lang.String tag, java.lang.String id, java.lang.String replacingTag)
private void	makeSubclassOf(Topic t, Topic superclass)
void	parse() Starts the parse.
void	processDefinition(Topic stanzaTopic, java.lang.String value, java.lang.String stanzatype, java.lang.String namespace)
private void	processHeader(OBOImport.Header header) Handles header of the OBO flat format file.
private void	processInstanceStanza(OBOImport.Stanza stanza)
void	processProperty(Topic base, Topic baseType, java.lang.String everything)
private void	processStanza(OBOImport.Stanza stanza)
void	processSubset(Topic stanzaTopic, java.lang.String value)
void	processSynonym(Topic base, java.lang.String everything, java.lang.String namespace)
void	processSynonym(Topic base, java.lang.String synonymScope, java.lang.String everything, java.lang.String namespace)
private void	processTermStanza(OBOImport.Stanza stanza)
private void	processTypedefStanza(OBOImport.Stanza stanza)
void	processXref(Topic stanzaTopic, java.lang.String scope, java.lang.String everything, java.lang.String namespace, java.lang.String stanzatype)
private void	setData(Topic t, Topic type, java.lang.String lang, java.lang.String text)
private java.lang.String	solveNamespace(OBOImport.Stanza stanza, java.lang.String id, OBOImport.Header header, java.lang.String defaultNamespace)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

debug

public boolean debug

deprecationMsgLimit

public int deprecationMsgLimit

tm

private TopicMap tm

parent

private OBOImport parent

in

private java.io.BufferedReader in

header

private OBOImport.Header header

stanza

private OBOImport.Stanza stanza

stanzaCounter

private int stanzaCounter

root

Topic root

wandoraClass

Topic wandoraClass

Constructor Detail

OBOParser

public OBOParser(java.io.BufferedReader in,
                 TopicMap tm,
                 OBOImport parent)

Constructor for OBOParser.

Parameters:

in - is the BufferedReader for OBO flat format file.

tm - is the Topic Map object where conversion is stored.

parent - is the OBOImport callback interface.

Method Detail

initializeTopicMap

public void initializeTopicMap(TopicMap tm)

Creates frequently used topics into the Topic Map before conversion starts.

Parameters:

tm - is the Topic Map where initialization is targeted.

parse

public void parse()

Starts the parse.

processHeader

private void processHeader(OBOImport.Header header)

Handles header of the OBO flat format file.

Parameters:

header -

processStanza

private void processStanza(OBOImport.Stanza stanza)

processTypedefStanza

private void processTypedefStanza(OBOImport.Stanza stanza)

processTermStanza

private void processTermStanza(OBOImport.Stanza stanza)

processInstanceStanza

private void processInstanceStanza(OBOImport.Stanza stanza)

solveNamespace

private java.lang.String solveNamespace(OBOImport.Stanza stanza,
                                        java.lang.String id,
                                        OBOImport.Header header,
                                        java.lang.String defaultNamespace)

logDeprecation

public void logDeprecation(java.lang.String tag,
                           java.lang.String id)

logDeprecation

public void logDeprecation(java.lang.String tag,
                           java.lang.String id,
                           java.lang.String replacingTag)

processSubset

public void processSubset(Topic stanzaTopic,
                          java.lang.String value)

processDefinition

public void processDefinition(Topic stanzaTopic,
                              java.lang.String value,
                              java.lang.String stanzatype,
                              java.lang.String namespace)

processXref

public void processXref(Topic stanzaTopic,
                        java.lang.String scope,
                        java.lang.String everything,
                        java.lang.String namespace,
                        java.lang.String stanzatype)

processSynonym

public void processSynonym(Topic base,
                           java.lang.String everything,
                           java.lang.String namespace)

processSynonym

public void processSynonym(Topic base,
                           java.lang.String synonymScope,
                           java.lang.String everything,
                           java.lang.String namespace)

processProperty

public void processProperty(Topic base,
                            Topic baseType,
                            java.lang.String everything)

createAssociation

public Association createAssociation(java.lang.String associationType,
                                     Topic player1Topic,
                                     java.lang.String role1,
                                     Topic player2Topic,
                                     java.lang.String role2)
                              throws TopicMapException

Throws:

TopicMapException

createAssociation

public Association createAssociation(java.lang.String associationType,
                                     Topic player1Topic,
                                     java.lang.String role1,
                                     Topic player2Topic,
                                     java.lang.String role2,
                                     Topic player3Topic,
                                     java.lang.String role3)
                              throws TopicMapException

Throws:

TopicMapException

createAssociation

public Association createAssociation(java.lang.String associationType,
                                     Topic player1Topic,
                                     java.lang.String role1,
                                     Topic player2Topic,
                                     java.lang.String role2,
                                     Topic player3Topic,
                                     java.lang.String role3,
                                     Topic player4Topic,
                                     java.lang.String role4)
                              throws TopicMapException

Throws:

TopicMapException

getOrCreateTopic

private Topic getOrCreateTopic(java.lang.String si,
                               java.lang.String basename)

getOrCreateTopic

private Topic getOrCreateTopic(java.lang.String si)

getOrCreateTopic

private Topic getOrCreateTopic(Locator si,
                               java.lang.String basename)

setData

private void setData(Topic t,
                     Topic type,
                     java.lang.String lang,
                     java.lang.String text)
              throws TopicMapException

Throws:

TopicMapException

makeSubclassOf

private void makeSubclassOf(Topic t,
                            Topic superclass)